bioinformatics-list January 2020

bioinformatics-list@list.utas.edu.au

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A little more information on the next AusBiocommons workshop on information visualisation
by Michael Charleston 28 Jan '20

28 Jan '20

This extra wording is now on the Eventbrite page for the event: ___ LEARNING OUTCOMES By completing this workshop you will learn to generate a multi-track Circos image and use rules to format the image dynamically based on data values and positions. INTENDEND AUDIENCE This workshop is aimed at biologists and bioinformaticians with no previous Circos knowledge. A familiarity with the Galaxy environment is assumed. Please bring along: * your Galaxy Australia login credentials * a WIFI enabled laptop You can apply for a free Galaxy Australia account using an Australian university email address here: https://usegalaxy.org.au<https://protect-au.mimecast.com/s/8qzcCOMxQoFLyAKrFEHuJB?domain=usegalaxy.o…>. You can watch a quick introduction to using Galaxy Australia on the Australian BioCommons youtube channel<https://protect-au.mimecast.com/s/uSZ9CP7yRpt1k4xAT0xFIV?domain=youtu.be>. If you need to brush up on your Galaxy knowledge, you can find great background information that's easy to follow here: https://training.galaxyproject.org/training-material/topics/visualisation/t…<https://protect-au.mimecast.com/s/TFsRCQnzVqt1y6W4TMWsik?domain=training.ga…> University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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Fw: Register now: Using Circos in Galaxy Australia webinar & workshop
by Michael Charleston 24 Jan '20

24 Jan '20

Hi folks, I nice opportunity to learn some data visualisation as it pertains to bioinformatics! Please register if you are interested. I'll be facilitating the event here in Sandy Bay if you would like to come along. The room holds about 15 (though if there's a sudden flurry of interest I'll try to find somewhere bigger!). Cheers Mike Michael Charleston [cid:05ba583b-d22b-45f0-8805-4354810c1269] Mathematical Biology Group Organiser of Phylomania<http://www.maths.utas.edu.au/phylomania/phylomania2018.htm> conference 2019 November 20-22 Associate Professor in Bioinformatics Associate Head of School (Learning and Teaching) Academic co-Lead, UTAS - Data, Knowledge, Decisions School of Natural Sciences University of Tasmania AUSTRALIA Phone: +61 3 6226 2444 ________________________________ From: Christina Hall <christina(a)biocommons.org.au> Sent: Thursday, 23 January 2020 11:37 PM To: Christina Hall <christina(a)biocommons.org.au> Subject: Register now: Using Circos in Galaxy Australia webinar & workshop Dear colleague, We are excited to share the details of two upcoming Australian BioCommons / Galaxy Australia training events. Lucky for us, Martin Krzywinksi from Canada's BC Cancer Genome Sciences Center is visiting Melbourne and he has agreed to take part in a couple of national training activities on Monday 3 February, 2020. Martin Krzywinski works in bioinformatics, data visualization, science communication and the interface of science and art. He applies design, both data and artistic, to assist discovery, explanation and engagement with scientific data and concepts. Martin is the creator of Circos and hive plots and his information graphics have appeared in the New York Times, Wired, Scientific American and covers of numerous books and scientific journals such as Nature and Genome Research. He is a co-author of the Nature Methods Points of View and Points of Significance columns. WEBINAR: The essence of data visualization in bioinformatics Mon 3 Feb, 12:00-13:00 AEDT / 11:00-12:00 AEST / 9:00-10:00 AWST WORKSHOP: Using Circos in Galaxy Australia Mon 3 Feb, 14:00-17:00 AEDT / 13:00-16:00 AEST / 11:00-14:00 AWST Further information and registration details are available here: https://www.biocommons.org.au/events<https://protect-au.mimecast.com/s/idNAC81Zm7f5A815Tn_Ywx?domain=biocommons.…> Martin has put together a couple of posters to advertise the events (attached). Please distribute widely and we look forward to seeing you and your colleagues on the day. Kind regards, Christina. -- Christina Hall, PhD Training and Communications Manager Australian BioCommons Melbourne Bioinformatics, University of Melbourne M: +61 (0) 402 973 338 W: biocommons.org.au<https://protect-au.mimecast.com/s/QHqiC0YZ4yFX90VXT2eEkR?domain=protect-au.…> This position is funded by Bioplatforms Australia and hosted at Melbourne Bioinformatics, University of Melbourne I acknowledge the Traditional Owners of the land on which I work, and pay my respects to the Elders, past, present and emerging [https://docs.google.com/uc?export=download&id=1sSOPhFHGho1UC8FJte2UAPCHvX8B…] University of Tasmania Electronic Communications Policy (December, 2014). This email is confidential, and is for the intended recipient only. Access, disclosure, copying, distribution, or reliance on any of it by anyone outside the intended recipient organisation is prohibited and may be a criminal offence. Please delete if obtained in error and email confirmation to the sender. The views expressed in this email are not necessarily the views of the University of Tasmania, unless clearly intended otherwise.

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bioinformatics-list January 2020